BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B06SP1|AL425811
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1657 1364 0.0
>3x_Contig1657
Length = 14558
Score = 1364 bits (677), Expect = 0.0
Identities = 759/796 (95%), Gaps = 3/796 (0%)
Strand = Plus / Plus
Query: 1 aagatgtcggacagcggtcttcatgatcccttccaactgttcccyagtacagattcysgc 60
|||||||||||||| |||||||||||||||||| |||||||| | ||||||||||| ||
Sbjct: 869 aagatgtcggacaggggtcttcatgatcccttcgaactgttcgctagtacagattctggc 928
Query: 61 gtga--catgagccstcgtggaaccatacacagtttgatgccatgttggagatattgcct 118
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 gtgagccatgagccgtcgtggaaccatacacagtttgatgccatgttggagatattgcct 988
Query: 119 gaaaatctgaacttggatgttgggggactgcaacaagacacttcgtctccygtcgctacy 178
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 989 gaaaatctgaacttggatgttgggggactgcaacaagacacttcgtctcctgtcgctact 1048
Query: 179 actctsaaattccaatcyaatacyacyacyacyaccattacaaatscttctatgaaamat 238
||||| |||||| |||| ||||| || || || |||||||||||| ||||||||||| ||
Sbjct: 1049 actctgaaattcgaatctaatactactactactaccattacaaatgcttctatgaaagat 1108
Query: 239 gatggtagcccccatgttattggcgaagaggatgatgaaggtggctggaaaacaccygtc 298
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1109 gatggtagccccgatgttattggcgaagaggatgatgaaggtggctggaaaacacctgtg 1168
Query: 299 gcagaaatatcatcscataatgggttgaaaaataggccsatagatattgttcaaagtgtt 358
|||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 1169 gcagaaatatcatcgcataatgggttgaaaagtaggccgatagatattgttcaaagtgtt 1228
Query: 359 acaccatcaacaactgcaggccagtyaattgggaaccacttgaatttgcaaaatggtgaa 418
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 1229 acaccatcaacaactgcaggccagttaattgggaacgacttgaatttgcaaaatggtgaa 1288
Query: 419 attgctcaactctgggattttaatgtccatgaatttatgatgacgcccagtgatcatagt 478
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1289 attgctcaactctgggattttaatgtccatgaatttatgatgacgccgagtgatcatagt 1348
Query: 479 gattccccaaccataagtgccccctcatctttcaactcacaacaattcactccaggaaca 538
|||||| |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 1349 gattccgcaacgataagtgccccgtcatctttcaactcagaacaattcactccaggaaca 1408
Query: 539 acyacacctggcttcaatcccccatctagcacggcgtccataact-aataataattacaa 597
|| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 1409 actacacctggcttcaatcccgcatctagcacggcgtccataactaaataataattacaa 1468
Query: 598 taatggcaataataaccgcaacaataataataataataataccaactctaattcgcattt 657
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1469 taatggcaataataacggcaacaataataataataataataccaactctaattcgcattt 1528
Query: 658 ccaaaacagttggaatcacttgttacaccagcaacatgataatggaccgaacagcagctc 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1529 ccaaaacagttggaatcacttgttacaccagcaacatgataatggaccgaacagcagctc 1588
Query: 718 tttggcgtaccaacaccctagattattccaaaacaataactctagtcagtcaacaatcaa 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1589 tttggcgtaccaacaccctagattattccaaaacaataactctagtcagtcaacaatcaa 1648
Query: 778 agcagatgaataccaa 793
||||||||||||||||
Sbjct: 1649 agcagatgaataccaa 1664
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5666
Number of Sequences: 1807
Number of extensions: 5666
Number of successful extensions: 458
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)